YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73968835
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSRSYPLP LVRSARARCP GAGLRPAPPP RALTVTAARA GHRLAWRGEQ EGGLPPSWGI  60
   61 RLRLLLEGLF SSGGAEVSPL AGPRPSAGRT GLRRLLAQPA AASPLRPAGL QTDRPPPAMA 120
  121 WLLTGTLGCI SLLYLLLPGA LSRSLGGSQQ PAPPREPPAR APSSSLKPRS PAPRPVAWKL 180
  181 QQALQPPRRT SRAPATGQPL RDGAHRRRGP RRSRAQLLRV GCVLGTCQVQ NLSHRLWQLV 240
  241 GSAGPRNAAP MDPSSPYSYG

Type	Start	End	Confidence
Cytoplasmic	1	117	0.70
Transmembrane Helix	118	141	0.85
Non-Cytoplasmic	142	260	0.63