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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968523
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLFVSEGAP GSLPVLAAAG RAQGRAELLV STVGPEECVV PFLTRPKIPV LQLDSGNYLF  60
   61 STSAICRYFF LLSGWEQDDL TNQWLEWEAT ELQPALSAAL YYLVVQGRKG EDVLGPVRRA 120
  121 LTHIDYSLSR RSCPFLAGDT ESLADIVLWG ALYPLLQDPA YLPEELGALH SWFQTLSSQE 180
  181 PCQRAAETVL KQQGVLALRP YLQKQPQPGS FEGRAVSNEP EEEELATLSE EEIAMAVTAW 240
  241 EKGLGSLPPL RPQQNPVLPV AGERNVLITS ALPYVNNVPH LGNIIGCVLS ADVFARYSRL 300
  301 RQWNTFYLCG TDEYGTATET KAMEEGLTPQ EICDKYHAIH ADIYRWFNIS FDIFGRTTTP 360
  361 QQTKITQDIF QRLLTRGFVL QDTVEQLRCE RCARFLADRF VEGVCPFCGY EEARGDQCDK 420
  421 CGKLINAIEL KKPQCKVCRS CPVVKSSQHL FLDLPKLEKR LEEWLGKTLP GSDWTPNARF 480
  481 IIRSWLRDGL KPRCITRDLK WGTPVPLEGF EDKVFYVWFD ATIGYLSITA NYTDQWERWW 540
  541 KNPEQVNLYQ FMAKDNVPFH GLVFPCSALG AEDNYTLVSH LIATEYLNYE DGKFSKSRGV 600
  601 GVFGDMAQDT GIPADIWRFY LLYIRPEGQD SAFSWTDMLL KNNSELLNNL GNFINRAGMF 660
  661 VSKFFGGYVP EMVLTSDDRR LLAHVTLELQ HYHQLLEKVR IREALRSILT ISRHGNQYIQ 720
  721 VNEPWKRIKG SEADRQRAGT VTGLAVNIAA LLSVMLQPYM PTVSATIQAQ LQVPPPACSI 780
  781 LLTNFLCTLP AGHQIGTVSP LFQKLENDQI ESLRQRFGGG QVRKLNCAVT QQWPQSEAMA 840
  841 AAAPQQIQVL MDEVTKQGNI VRELKAQKAD KNQVAAEVAK LLDLKKQLAL AEGKPLETPK 900
  901 GKKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle