YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169784119
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDFKTVLA PPKRANSDYP LIDSDPHLRR VFGYARPSDY AIAGGAAAAS PLAFWAMERV  60
   61 SPSHVGRGGF APVMRLATAI GLIGGLHVLY QRSCNRFYGF TENSREVEMD TREMVDKVKR 120
  121 GESLYGTSKV SAYLQGVAAR NSRYSELFIH VLPWFNIVNH DQHGVDTAKY YQQAERELEA 180
  181 ERLAKAGSA

Type	Start	End	Confidence
Cytoplasmic	1	37	0.85
Transmembrane Helix	38	57	0.86
Non-Cytoplasmic	58	70	0.73
Transmembrane Helix	71	90	0.90
Cytoplasmic	91	189	0.82