YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169784105
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQTMNSTLL SAPPETYWGQ FEEISKYNTH LNVLERLWTA WYAWMQNDVL ATGIMSFVMH  60
   61 EIVYFGRSLP WIFIDSLGLL KGYKIQSNKI PSLREQWDCA KFVLLSHFTV ELPQIWLFHP 120
  121 MAQFFGLSTS VPFPTFWTMA YQIAIFFVLE DTWHYFSHRA LHWGPLYKAI HKIHHQYSAP 180
  181 FGMAAEYASP IEVMILGFGT VGCPILWCAV TGDLHIFTMY VWIVLRLFQA IDAHSGYEFP 240
  241 WSLHHFLPFW AGADHHDLHH EKFVGNYSSS FRWWDYLLDT EYSPEAIKRR RENKAGGDAR 300
  301 KDQ

Type	Start	End	Confidence
Cytoplasmic	1	123	0.55
Transmembrane Helix	124	148	0.70
Non-Cytoplasmic	149	190	0.54
Transmembrane Helix	191	224	0.67
Cytoplasmic	225	303	0.69