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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83775205
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAPSAAYQ TSPNHGLSSS QDGRSVNSRP DTRPSTTYDP LASETTQDPQ IDSKSTTGKR  60
   61 AKRKKKHRKR RNRRQSFIGA EDPHAGAPTT PGPEVEHMAM MADQTKSRGA LPFYKLGRDL 120
  121 SSTSLESEAL LDHRNQPMMR PRRDSRLAQS FRPGSLSTTI RTGDLGSRNQ PSGTRTLPVD 180
  181 DDSDGPDPVD DRTPLMRPSS AHRANISRYG TDSKSTPFSF RQRRSSVQTN SSRCSPRRIP 240
  241 SPGFPEQDRD YDINNPPSMP TSPKLRADMG YDDAVVTGAD FDFSLAKSID NRMESMPLSH 300
  301 DMVIDVESGT NRIRSSPPSV SPRHRPPQEG LLRRRTLPAE EDVCFPTEEV SELADEDAAR 360
  361 ASRETERRRR RRREWPDLSV LEEWSREEKE ERTGDFRAKK ISEPVLIEGR LRPQYQLWRR 420
  421 EEEEAPYRFT YFNEEFQSTI HAQTISELVQ PGSSFRELFI PDPPELEVSS EDETDSDHDP 480
  481 EEEPFDNKHH NNHGFDGNRT SPFINSHHDN IDGSKQQPRM SIISEAVSEA RTSANASPSR 540
  541 RPYQQTKPKK YGPRPTFWLD VLCPTDAEMR VIAKAFGVHA LTAEDIMMQE AREKVELFRN 600
  601 YYFVNYRTFD QDPNSENYLQ PVNMYVVVFR EGVLSFHFSQ TPHPANVRRR IRQLMDYLIL 660
  661 SSDWISYAII DDITDVFGPL IQSIEDEVDE IDGMIMKMHS PEPVMGQSSK LEDDGVEAST 720
  721 TLAPGEVLRR VGVCRKKVMG MYRLLSNKAD VVKGFAKRCN EQWEVAPKSE IGLYLGDIQD 780
  781 HIMTMTSSLT YYETLLSRAH SNYLAQINIL MNERQEQTAD VLGKLTVMGT IVLPLNIICG 840
  841 MWGMNVKVPG QDVDSLTWFW SITAGLIIFA FASFLIAKRV YKIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle