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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169783450
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRRLCSYS KPLLNSSKSS WFIIRANGFA LFSRSLSSLV RFFSNAVFLR YSKLKETHLA  60
   61 PLTQTFTRSS STSTIKAESG EETPVVSQAP TPTISTSNIN GISASESLVS PPVAPVKPGI 120
  121 LIVTLHEGRD FALSPQYQQI FNSHFQNNYA MRPSSSSSHS THGQAASFVH NGRPQSTSGG 180
  181 INAAPTIHGR YSTKYLPYAL LDFEKNQVFV DAVSGSPENP LWAGDNTAFK FDVSRKTELN 240
  241 VQLYLRNPAA RPGAGRSEDI FLGAVKVHPR FEETQQFVED PKLSKKDNQK AAAAHAAQER 300
  301 HLGQLGAEWL DLQFGTGSIK IGVKFVENKQ QSLKLEDFEL LKVVGKGSFG KVMQVMKKDT 360
  361 GRIYALKTIR KAHIISRSEV THTLAERSVL AQINNPFIVP LKFSFQSPEK LYFVLAFVNG 420
  421 GELFHHLQRE QRFDINRARF YTAELLCALE CLHGFKVIYR DLKPENILLD YTGHIALCDF 480
  481 GLCKLDMKDE DRTNTFCGTP EYLAPELLLG NGYTKSVDWW TLGVLLYEML TGLPPFYDEN 540
  541 TNDMYRKILQ EPLTFPSTDI VPAAARDLLT RLLDRDPQRR LGANGAAEIK SHHFFANIDW 600
  601 RKLLQRKYEP SFRPNVVDAR DTANFDREFT SEAPQDSYVE GPVLSQTMQQ QFEGWSYNRP 660
  661 VAGLGDAGGS VRDPSFGSIP E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle