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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968297
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPDHPEVMT GEEAKSWAPA RGAAKGLSPR APLISGRCEP EPRLPVVTLP PGAQLLRGET  60
   61 SAPGGPGARA GSEPRPGGPW KGSRLGAEAA RTLSPRSCSL CGGNRRSPAL LRIRLALRLG 120
  121 GPPRRQAPRA VLPPTGARVG AAEGPAGLGG RAPVPTQPRA RTRERPPEPP RRRCRSLAAQ 180
  181 VAPLGCPSRG PRDGSRGASA ASAGLMRATA PLQVLGFLLS LVRASYVGNS QAVCPGTLNG 240
  241 LSVTGDAENQ YQTLYKLYER CEVVMGNLEI VLTGHNADLS FLQWIREVTG YVLVAMNEFP 300
  301 TLPLPNLRVV RGTQVYDGKF AIFVMLNYNT NSSHALRQLR FTQLTEILAG GVYIEKNDKL 360
  361 CHMDTIDWRD IVRDRDAEIV VKDNGRSCPP CHETCKGRCW GPRPEDCQTL TKTICAPQCN 420
  421 GHCFGPNPNQ CCHDECAGGC SGPQDTDCFA CRLFNDSGAC VRQCPQPLVY NKLTFQLEPN 480
  481 PHTKYQYGGV CVASCPRKCL RRGTMIMEVD KNGSKMCEPC GGLCPKACEG TGSGSRFQTV 540
  541 DSSNIDGFVN CTKILGNLDF LITGLNGDPW HKIPALDPEK LNVFRTVREI TGYLNIQSWP 600
  601 PHMHNFSVFS NLTTIGGRSL YNRGFSLLIM KNLNITSLGL RSLKEISAGR IYISANKQLC 660
  661 YHHSLNWTRL LRGPPEERLD IKHNRPRRDC VAEGKVCDPL CSSGGCWGPG PGQCLSCRNY 720
  721 SRGGVCVTHC NFLNGEPREF AHEAECFSCH PECQPMEGTA TCNGSGSDAC AQCAHFRDGP 780
  781 HCVSSCPNGV LGAKGPIYKY PDTHNECRPC HENCTQGCKG PELQDCLGQT LALISKTHLA 840
  841 VGLTVVVGLA VIFLILGGTL LYWRGRRIQN KRAMRRYLER GESIEPLDPS EKANKVLARI 900
  901 FKETELRKLK VLGSGVFGTV HKGVWIPEGE SIKIPVCIKV IEDKSGRQSF QDVTDHMLAI 960
  961 GSLDHAHIVR LLGLCPGSSL QLVTQYLPLG SLLDHVRQHR GALGPQLLLN WGVQIAKGMY1020
 1021 YLEEHGMVHR NLAARNVLLK SPSQVQVADF GVADLLPPDD KQLLHSEAKT PIKWMALESI1080
 1081 HFGKYTHQSD VWSYGVTVWE LMTFGAEPYA GLRLAEVPDL LEKGERLAQP QICTIDVYMV1140
 1141 MVKCWMIDEN IRPTFKELAN EFTRMARDPP RYLVIKRESG PGIPPGAEPP ALTNKELEEV1200
 1201 ELEPELELDL DLETEEDGLA ATLNSALGLP VGTLNRPRGS QSLLSPSSGY MPMNQGNLGD1260
 1261 TCQESAICGT GERCPRPASL HPMPRGRLAS ESSEGHVTGS EAELQEKASM CRSRSRSPRP1320
 1321 RGDSAYHSQR HSLLTPVTPL SPPGLEEEDV NGYVMPDAHL KGTPSSREGT LSSVGISSVL1380
 1381 GTEEEEEDEE YEYMNRRRRH SPPRHPRPSS LEELGYEYMD VGSDLSASLG STQSCPLNPV1440
 1441 PLMPAAGTTP DEDYEYMNRR HAGGAPGGDY AAMGACPAAE QGYEEMRAFQ GPGNHAPHVH1500
 1501 CARLKPLRSL EATDSAFDNP DYWHSRLFPK ADAQRT

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