YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968275
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGAQGHWW DWARKAQQFV LAKKKACLIC GWDSTLPHWT GKVLGEDEEL EEEYDDEEPL  60
   61 KFPSDFSRVP SGKKPPPRRQ RHRILAKEDT RDGGRRDPRS PGRHRLGRKR SQADKRRGLG 120
  121 LWGAEELCQL GQAGFWWLIE LLVLVGEYLE TCGHLIYACR QLKGSDLDLF RVWLGVWAGR 180
  181 LGGWAQVMFQ FLSQGCCYGA GLFTRFLRLL GALLLLALAL FLGCLQLGWR FLVGLGDRLG 240
  241 WRGKATWLFS WLDFPTLQRC LILLRDSRPW QQLVKMFQWG WLELPWVKPR TNRQGNAPVA 300
  301 GGRYCQPEEE VARLLTMAGV PEDELNPFHV LGVEATASDV ELKKAYRQLA VMVHPDKNHH 360
  361 PRAEEAFKVL RAAWDIVSNP ERRKEYEMKR MAENELSRSV NEFLSKLQDD LKEAMNTMMC 420
  421 SRCQGKHRRF EMDREPKSAR YCAECNKLHP AEEGDFWAES SMLGLKITYF ALMDGKVYDI 480
  481 TEWAGCQRVG ISPDTHRVPY HISFGSRIPG TSGRQRATPD APPADLQDFL SRIFQVPPGQ 540
  541 MPNGNFFAAP QPGPGPTAAS KPNSTVPKGE AKPKRRKKLA ELKQECLARG LETKGIKQDL 600
  601 INRLQAYLEE HAEEEANEED VLGDETEEEE PKPIELPVKE EEPPEKTVDV ATEKKVVKIT 660
  661 SEIPQTERMQ KRAERFNVPV SLESKKAARA ARFGISSVSS KGLSSDAKPM VNLDKLKERA 720
  721 QRFGLNVSSI SRKSEDDEKL KKRKERFGIV TSSAGTGTTE DTEAKKRKRA ERFGIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle