YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83774013
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRVPSSAFF RAVPTTTKLC LKSNGPIKTQ WLVHHPWKVS LPRNLSQRLY SSEAASPVPP  60
   61 QTSKPRSRLR RFVGFTSIAL IAFTAGLVYQ TQKTVSRMMT VTLRTDEETL TAFVPADQFS 120
  121 QEVDEYIRNH PVAVELRENP AFTESRPHLK IPAELRDRHL TAGTLSGPDR IVVPPHVFSE 180
  181 KDGKSLVSIF YLGSAISGHL GIVHGGLLAT LLDEGMARCC FPALPNKVGV TANLNIDYRR 240
  241 PAMAESYAVL RAETVKVEGR KAWVEARIET LPKEGEEPAV LVEAKALFIE PKQAAAMSSL 300
  301 YNITN

Type	Start	End	Confidence
Cytoplasmic	1	71	0.94
Transmembrane Helix	72	89	0.95
Non-Cytoplasmic	90	305	0.84