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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83773199
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLGIFLFV YFLGGLTFIP LVLSLILLHA YLTLPSPPPV EQRCELAKDP LRRPGDDQYS  60
   61 LKSGTDELAE KFHRTHESDV AAGYFAVCRE YVPGGVNGKP PERTTPAGEV IAAESPSVYQ 120
  121 TMYRSLFDRK QTPTIEPTKN NGKSGKKARN VFYIVLRHGH LMLYDDANQV EVRYVISLAH 180
  181 HDVNICGGEG EIQEGELWLK RNAICLSRRL ESLADLGGPS PPFFLFSENL SEKEDFYFAM 240
  241 LQNQSRMWNS PDAPPKHQPF DVKHIVTLVQ RLHSSEEQLQ TRWINAVLGR LFLAMYRTPE 300
  301 MEEFVRKKIT KKISRVNKPN FISKIGLQRI DMGEGAPFII NPRLKDLTVD GNCCVETDVQ 360
  361 YNGNFRVEIS ATVRIDLGPR FKAREVDIVL AVVLKKLHGH LLIRFKPPPS NRAWISFETM 420
  421 PSMDMDIQPI VSSKQITYGI ILRTIESRIR EVVAESVVQP FWDDIPFLDT ATQRFRGGIW 480
  481 QRDIPTPDTK VDIPDESGAQ PPTTGAEKVD LVDVLKTKDE RTMSAPVLSE SIPITMKPRK 540
  541 GSKGELERNN SSASYAAIEK FGSSPPRAIR SQTFSNAADP VLTADNAKID KVVYDGKDAE 600
  601 KSSAASAMIE ISNRSPPGSP NRSPSGSPPT DSHMPQDNAS QSRDPSIVES IESVGEFSTD 660
  661 SSVHPSTVHK TSSSSLRSMA ASSTASPSGN KPRRSTLEAL ARSVTSSTTA EKSQVSLSLG 720
  721 TATSVAKRWG WNMFSKGEQN ATHESPRPAG TPEEPIGRGH PLPPPGTPLP RPESFVFKRN 780
  781 SVPVTKRKPV PHNASAEQQP KGDGKRRVSK PPLPRRNPIF DSGDSENHPD ELLVVEAPYD 840
  841 SGPNSPVVDV APDNALPGPS TQRDSPTSKV IMRRSNELWE KANGHDRSSL VEDTEADKHG 900
  901 MAILSATDGI IP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle