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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|220701699, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSWIQRHAG SQQTQLAATA VLSGAAVAGA IFGYQALKRK EAVKELKASI PNIDEKHIAA  60
   61 KLTKFGGADP VQQLSKEDER SAALARRAQM GDYDDELILE QLARNRVFLT DEGLEKLRSS 120
  121 FIIVVGCGGV GSHAAASLSR SGASKIRLID FDQVTLSSLN RHALATLADV GTPKVHCIRK 180
  181 RLEQITPWTK FDCRNELFSG SVADGLLAPW SMDDSDKGRK PDYVLDCIDN ITSKVELLHY 240
  241 CHSHSIPVIS SMGAGCKSDP TCVTVGDIST STDDPLSRST RRRLKILGVS TGIPVVFSTE 300
  301 KPGPGKASLL PLAEEEFNKG QVGELSVLPD FRARILPVLG TMPAVFGYTV ANHVICDIAG 360
  361 YPRDYSIARK GKDKIYDSVQ TATQGFMERL ARVEVGQHVI GLRLPITKGD VVFLVDDIWR 420
  421 GKSAITGLPG RLILVPWERP ARGFVPDPEW EKQGQKFLPF ELKDLVCMTK EESARHEKEV 480
  481 LLGGKKPEDL YDEKTIQRVK ERMEEAGFYE RFR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle