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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169766934
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRWRLPGARS TLPASVALLL LPVLVAPQQQ PEHHDLPSTL SVPLGSTGHA VGKDLYTPLN  60
   61 VKSTDASALA TMALAGPGRA VRAPPAQVSS PSAGLSTPLN ARSLQDWEVE DFVLLATVDG 120
  121 SIHARDRKTG TARWALEVPS SPMVESIYHR ANRSSFDRTQ PEDDFIWIVE PSQDGSLFIY 180
  181 SPGPDAGLQK LGLTVKDLVD KTPYSGTDPA VTYTARKETT LYTIDARTGT ILRVFSSRGP 240
  241 IPSGQECRKV DGLDMDSDDC ESPSGTLVLG RIEYAVAIQN TETGDPICTL KYSEWAGNNR 300
  301 DLDLQDQYYR TMDESHIYSM HDGVVLGFDH SRMERPRYTQ RFSSPVARVF DVIRPTNLDS 360
  361 PDAPTPLVLL SQPLQPPDPD YGSLDDRDTR VYIDSTEAGG WYALSEETYP LVTGRAKMAQ 420
  421 CYEKDYFRHG QALMSLTPGQ QRDALAGVHS LNGPRFVRHI PSLSGSSRSE LSNGTPQDLA 480
  481 RSHSDLALPP ALRHSTIIRK GWDNAVDIFV TLILLFFGAF IYFNSHNIQE LAKQKLDIKN 540
  541 IISSYQPPLS TPSTPVVGAQ LKRDASPARP VPNVTVDVSV PEDQQQGGDT TPKPKKDRNT 600
  601 LGADSTPRVR IREPSRGPDG DEDVDEVALD GAEKPKKKAR RGRRGGKAHK RGKKPDSEGD 660
  661 SQTDRVVNDV NNLQPKSRLE PDVQMVRTVS NEIMEMDGVL QIGRLRVFTD VVLGHGSHGT 720
  721 VVYRGSFDGR DVAVKRMLVE FYDIASHEVG LLQESDDHAN VIRYFCREQA AGFLYIALEL 780
  781 CPASLQDVVE RPSDYPQLVQ GGLDVNMPDI LRQIICGVRY LHSLKIVHRD LKPQNILVAM 840
  841 PRGRSGARSL RLLISDFGLC KKLEDNQSSF RATTAHAAGT SGWRAPELLV DDDKSSVIQS 900
  901 TESQHTESSE PAVVDPQTNR RATRAIDIFS LGCVFYYVLT RGSHPFDKNG KFMREANIVK 960
  961 GNHNLDELER LGDYAFEARD LIQSMLSLDP RKRPDASSVL THPFFWNPSD RLTFLCDVSD1020
 1021 HFEFEPRDPP SEALLCLESV ASRVMGPEMD FLRQLPTSFK DNLGKQRKYT GSKMLDLLRA1080
 1081 LRNKCHHYND MPEHLKAHIG GLPEGYLSFW TVRFPSLLMS CHSVIVDLKL TRIDRFERYF1140
 1141 TVPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle