YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83765127
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRHITRRI LLGAAVSIFL LFVFFVRPQG PPSPAIRAPG HLEKASHSTL TKDDMVKGEV  60
   61 VMPKLGNETA KAELGRATWK YFHTMLARYP EDPTEEQQET LRSFIYLFAR LYPCGECASH 120
  121 FQGHLKKYPP QVSSRNAASG WGCFIHNEVN TMLKKPIFDC NKIGDFYDCG CAKDEDTEDE 180
  181 NEELKSRSHV DSKESDDIAT SQRFEVSKEP WVFPLASPHI SLSR

Type	Start	End	Confidence
Signal Peptide	1	28	0.81
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	224	0.98