YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73968209
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCARALRSR PPGLPSAGWR AAGSFVCLSR RQPAAILERA ARGLPGALWE RGRRGRVSSG  60
   61 PGTAVATGPE SVSESTTSYF FPHLPPLSLS HSRGRTTTAT TTTTTIIIIV KTYLGCSLLN 120
  121 PQRDILALAE FVHSVHELLI AKRFGNQQQR LWIWRSTPPQ RNTDQSTMPE VKDLSEALPE 180
  181 TSMDPITGVG VVASRNRAPT GYDVVAQTAD GVDADLWKDG LFKSKVTRYL CFTRSFSKEN 240
  241 SHLGNVLVDM KLIDIKDTLP VGFIPIQETV DTQEVAFRKK RLCIKFIPRD STEAAICDIR 300
  301 IMGRTKQAPP QYTFIGELNS MGIWYRMGKV PRNHDSSQPT TPSQSSAAST PAPNLPRHIS 360
  361 LTLPATFRGR NSTRADYEYQ HSNLYAISAM DGVPFMISEK FSCVPESMQP FDLLGITIKS 420
  421 LAEIEKEYEY SFRTEQSAAA RLPPSPTRCQ QIPQS

Type	Start	End	Confidence
Signal Peptide	1	29	0.56
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	455	0.99