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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968186
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKWRLESA RRRRRRRRRR SRALRLAPDR APERQRLRQQ RRPGPMQRDA PPRAPAPAPR  60
   61 LPAPPIGAAA NSGGGGGGGS GGGGGASAAP AAPGLPGTTS PRGPGGGRRT EEAGSAPRGR 120
  121 KWPWRRKWRG RGGAWSTAAG PGAGAAAAAA AGGGGGGALE AAMAKQYDSV ECPFCDEVSK 180
  181 YEKLAKIGQG TFGEVFKAKH RKTGKKVALK KVLMENEKEG FPITALREIK ILQLLKHENV 240
  241 VNLIEICRTK ASPYNRCKGS IYLVFDFCEH DLAGLLSNVL VKFTLSEIKK VMQMLLNGLY 300
  301 YIHRNKILHR DMKAANVLIT RDGVLKLADF GLARAFSLAK NSQPNRYTNR VVTLWYRPPE 360
  361 LLLGERDYGP PIDLWGAGCI MAEMWTRSPI MQGNTEQHQL ALISQLCGSI TPEVWPNVDK 420
  421 YELFEKLDLV KGQKRKVKDR LKAYVRDPYA LDLIDKLLVL DPAQRIDSDD ALNHDFFWSD 480
  481 PMPSDLKGML STHLTSMFEY LAPPRRKGSQ ITQQSTNQSR NPATTNQTEF ERVF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle