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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73968174
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEQQASCE KTVFQTGEGP VCGASVWLPG LHTQAQKADG EEREGPPELI PAVKTGHRNG  60
   61 RLGSEAMGKS ENGGTRNAFG NYISRHARGG RHPPVLGHVV AGPPTDYDSR RAPRLRAGKP 120
  121 RIRIRAAASG WGATGTDQVV GLGLVAVSLI IFLYYTAWVI LLPFIDSQHV IHKYFLPRAY 180
  181 AVAIPLAAGL LLLLFDGIFI IFIMSSAPGT GCGTELVPKK VVWMSHSDDR VVGRRTGEIF 240
  241 PPGDPVPRVA APPQPGQRPE GCCSSGGGLR RRSPAPPARI GCSRDRRRPI GRPRSRGGDR 300
  301 LLQRGGGDAA GAREAAAGAM AAPSPGPREV LAPSPEAGCR AATSTSGRCG LLWRLRDKQA 360
  361 RIGLFEIGPG HELHQLTCMM QAGLWAATQV SMDHPTTGPP TEEDFSEVLT QVHEGFELCT 420
  421 LAGPAFSWLR RSLGLAEEDY QAALGPGGPY LQFLSTSKSK ASFFLSHDQR FFLKTQRRRE 480
  481 VRALLAHLPR YVQHLQRHPH SLLARLLGVH SLRVARGKKE FFIIMLSVFY PAGRISERYD 540
  541 IKGCEVSRWV EPAPEGSPLV LVLKDLNFQG KTIDLGPQRS WLIHQMELDT AFLRELNVLD 600
  601 YSLLMAFQRL HEDERGPGSS LIFRTARSVR GAQSPEEPGA QNRRLLPDSP NALHILDGPE 660
  661 QRYFLGLVDL ATVYGLRKRL EHLWKTLRYP GRTFSTVSPA RYARRLCQWV EAHTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle