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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PBN1_ASPOR
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRITFVQR PETPFSLDQA VLTPDALALH GIDGAREERA TFSVDELPEE LSDVLKQCHQ  60
   61 LHVRWASERR YDAVAPFSSR VSPGLHVFYT PVDGSSEENK LKSLCALLKR AFDYGLKCKS 120
  121 PETLEESFIT PPILSTRFAS TAAFQYHSLL PTLDNLVAYI ENKICSSSDE QCLRYAASIR 180
  181 SADSVDINYD SISHSLTVLG YWSQSPKNGW TDEIRRHAAG TDQVEVGLLG TEAATEPEDI 240
  241 KMGGLLAVVG KDDQLSMLSS GLPSEFGVAY GYGTDDSWAE PTLFSFPSRH QPLPEDATYS 300
  301 ISFTSPTGLH PTMTISMPPS SLNSPPAPPD ATCALHTYLT LPSTIFGDKY QLSTTDPLFL 360
  361 DSHNLVALHA VAGETDLEAP DWFVSRWGSN WLLELATPSE SDQVPEEWNV TIPLHLRYLR 420
  421 PSESGYRSAS VPWPVVFWAC TAEDGTKMGV NPFDRVNLGW EGLFGTRTMF YQLHPSSDRL 480
  481 VEELEVPVLQ LDDKGFFQSK AIELGTMIVI GLGSLWVLWK LGAIAWSSGT RPQRKSTKQK 540
  541 KSE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle