YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169776633
Protein type:	Transmembrane
Type Confidence:	0.61
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPEWPWILH SVCIIMVSLP AYDYLFKLLL IGDSGVGKSC LLLRFADDTY TESYISTIGV  60
   61 DFKIRTIELD GKTVKLQIWD TAGQERFRTI TSSYYRGAHG ICVVYDVTDM DSFNNVKQWL 120
  121 QEIDRYATEG VNKLLVGNKS DMEDKKVVEY TVAKVCSSLY LFPYSLEQTT SAFPQSARRL 180
  181 IRYIEFADSL GIPFLETSAK NASNVEQAFL TMARQIKERM GTATVNNKPT VQVGQGQGVQ 240
  241 SGSAGGCC

Type	Start	End	Confidence
Cytoplasmic	1	6	0.24
Transmembrane Helix	7	26	0.58
Non-Cytoplasmic	27	248	0.65