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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238502401, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWDHLDIDK PHLAYMILGG FTGLFMLCSL FVKEKLYIGE ATVATLCGII FGPHAANLFN  60
   61 PHEWGNVDKI TLECSRIVLV VQCFAVGVEL PKSYMNRHWK SVFLLLVPVM TWGWLITSLF 120
  121 IWWMVPPLSW LESLVCAACV TATDPVLASS VVGKGKFAKR VPKHLRDLLS AESGCNDGMA 180
  181 FPFIYLSFYI LRYRPDAGKV TLNWICVTIL YECIFGAVYG FLIGYFARHS IKYAERKQLI 240
  241 DRESFLVFYF VLAVFCAGSG SLLGMDDLLI GFAAGVGFSN DGWFTEKTEE SHVSNVIDLL 300
  301 LNLAYFVYFG SIVPWEMYNA PELGLVPWRL VVIAILVIFF RRIPIMLILK PIIPDVKTWR 360
  361 EALFAGHFGP IGVGAIFAAI LARAELETDS TQPLTEAELP KAGTADYYIV QLIWPITTFM 420
  421 VISSILVHGS SIAVFTLGKR INTLTITLSY TTANEEGPSW MNRLPRVQSI AKGSMSFRKP 480
  481 DDTDASSNEQ EYPPGTLPPI GVPGNFLRRV RDEDTESPTG RTSSRRPRRR RRHASGAGGP 540
  541 ISQSAIAPQR TVESEDAEEE DERDKIEREG SPPSKERDQF GREPIVEAYL EGHHMIIEDE 600
  601 EGNVLKTEDV SHVSPEERQR HIEAQRDRLL QEKSGEFAKS KSQPHARSEG EEVEEALEEK 660
  661 AGHPLEKARK RFGQWIGLGK GRAQEVEDQE VEKAPTTKQQ PTATDKKPKG KSRSAHAYQF 720
  721 GNTIIVEDED GEVIKKYSIP STDKPETGAP VRRGLTRMGT WFGMDGEGEP SQAEKKSAND 780
  781 DWLADDGLRF TVADDDNISK KGVSHKGRRM NKHEFVQQLR NLGPRARREL VEETDVPQHV 840
  841 KEVARDEARD AERKESLAGG SAQDTQHGTT PARPASISSS ESSNGSDIGV PGDNIAASLA 900
  901 RFTRGTAAEE RRSTLNPSTR PRSRRDSEDD GTERVPPAQL REAAGLSPPP QQDDDDTGET 960
  961 PAERRRRLAA LGELNLDDSD ESDAAVESDS EDNTGFRRVG SKVQFVEGTK PSDSGNGSNS1020
 1021 NQGNGSSSSS SAHQRSISWG GEKGREA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle