YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|220698656, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPATTADTLS LVTRTVTVAP LVLLSVADHY GRSAKGTRKR VVGVLLGENS GQNVRVSNSF  60
   61 AVPFEEDEKD PSVWFLDHNF VESMRDMFKK INAREKLIGW YHSGPKLRAA DLEINELFKR 120
  121 YTPNPLLVIV DVQPKEVGVP TDAYFAVDEI KDDGTTTSKT FVHTPSIIEA EEAEEIGVEH 180
  181 LLRDIRDVAV GTLSTRITSQ LQSLQGLHLR LRDIGQYLQK VLDHELPVNH AILGNLQDVF 240
  241 NLLPNLSTPP ATPRLSGSEQ QSENSELARS MSIKTNDQLM AIYLSSLIRA ITAFHDLIEN 300
  301 KIQNRQQQEE NEQKREQETN AAKGEKEAKK ANGAINGEQK EELDGSKEKY KKKGQ

Type	Start	End	Confidence
Signal Peptide	1	27	0.49
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	355	0.96