YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GET1_ASPOR
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.28
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSLIWTIFF LHVAIYVVNT AGASTIDSLL WLLYLKLPTS TSKNAREQSR LKREALELKR  60
   61 DMNNTSSQDE FAKWAKLRRR HDKTMDEYEQ LNKTLTAQKS SFDWSVKIAR WLSTNGLKIF 120
  121 LQFWYSKTPV FALPEAWIPY YVQWILSFPR APMGSVSVHV WNSVCATAVS VTAEMVTSMF 180
  181 LQTARPTPVA TAQKTQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.54
Transmembrane Helix	8	34	0.62
Cytoplasmic	35	122	0.54
Transmembrane Helix	123	138	0.28
Non-Cytoplasmic	139	196	0.52