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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169773659
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNGRGRRKN GSVKAPKNRQ RPTMSHLISE QSLPTRSKSS VASDDSVDTS DDTSAAPSFS  60
   61 SSPPSTKSIT NGVHRPAMAR KASSPMAPAF MVSAPGKVIV FGEHAVVHGK AAMAAAISLR 120
  121 SYLLVTTLTK SQRTITLNFR DIGLNHTWSI DELPWDLFHQ PTKKKYYYDL VTSIDPELLD 180
  181 AILPLVERIS PDLPEDKRKH QRGAATAFLY LFCALGSPQH PGAIYTLRST IPTGAGLGSS 240
  241 ASICVCISAA LLLQIRTLAG PHPDQPPDEA EVQIERINRW AFVGEMCIHG NPSGVDNTVA 300
  301 AGGKAVIFRR GDYSKPPAVS SLPNFPELPL LLVDTRQSRS TAVEVAKVGQ LKEEQPLVTE 360
  361 AILDTIEKVN ASAQEIIRET DSSGISKDTL ERIGALIRIN HGLLVSLGVS HPRLERIREL 420
  421 VDFANIGWTK LTGAGGGGCA ITLLRPDADP SAIRQLEEKL DEEGFAKYET TLGGDGVGVL 480
  481 WPAVVRNGTD EEGGEEIDQQ KFENADGPEG IERLVGVGTQ EKREGWKFWK RAMH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle