YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83767841
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.45
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVLRAPTD CPSADDTSIA SPRAASPLTS GAESGPDSKA SGSGAGAAGS VSSVARTSSP  60
   61 TPPGGPRAAL RRRAAADHKE SLRNARPSST RAAGAGGSSG TMLKLYTDES PGLRVDPVVV 120
  121 LVLSLGFIFS VVGLHVIAKI TRKFSS

Type	Start	End	Confidence
Cytoplasmic	1	87	0.71
Transmembrane Helix	88	107	0.45
Non-Cytoplasmic	108	117	0.66
Transmembrane Helix	118	138	0.93
Cytoplasmic	139	146	0.70