YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73967467
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPPLPPPAP HRDFISVTLS LGQSYDGSKS WRRRSCWRKW KQLSRLQRNV ILFSLTFLML  60
   61 CGFLSYISVA DQWTAVDGRS AEEQKTRPAD PPVLPAPQKA DAHPENMQGA LPQKPQRHFR 120
  121 RGPPNLHLRA PGKDSEDPRQ GDTKRRDEAV GDAHQEESTQ RTVVSWRGAV IEPQPGTELP 180
  181 SRKAEAPARP SSQAPRIQNP AASPNERQRA VIDAFRHAWA GYRKFAWGHD ELKPVSRSFS 240
  241 EWFGLGLTLI DALDTMWILG LKKEFEEARK WVSKKLRFQK DVDVNLFEST IRILGGLLSA 300
  301 YHLSGDELFL RKAEDFGNRL MPAFQTPSKI PYSDVNIGTG AAHPPRWTSD STVAEVTSIQ 360
  361 LEFRELSRLT GSKKFQEAAE EVTRHVHSLS GKKDGLVPMF INTHSGLFTH MGVFTLGARA 420
  421 DSYYEYLLKQ WIQGGKQETQ LLEDYLEAIE GIRRHLLRRS EPRKLTFVGE LAHGRFSAKM 480
  481 DHLVCFLPGT LALGAHHGLP ADHMELARAL MDTCYQMNRQ METGLSPEIV HFNLYPQNDH 540
  541 KDVQVKPADR HNLLRPETVE SLFYLYRLTG DRKYQDWGWE ILQSFNTYTR VPSGGYSSIS 600
  601 NVQDPLNPQP RDKMESFFLG ETLKYLYLLF SDDPDLLSLD TYVFNTEAHP LPIWAPPREV 660
  661 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle