YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169769188
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASARSLMRL GTGRSLASAA RSSRMCRPFS TTPLLKESIP EPPNMRQAQR PPEGALRAPI  60
   61 VNPADKYQDK ADALHQYGQY VMSCLPKYVQ QFTVWKDELV IYVPPSGVVP LMSFLKYHTA 120
  121 AEFTQISDIT AVDFPTKDQR FEVVYNLLSV RHNSRIRVKT YADEATPVPS VTGLFEGALW 180
  181 YEREVYDMFG VFFTGHPDLR RIMTDYGFDG HPLRKDFPLT GYTELRYDEE KKRIVIEPLE 240
  241 LTQAFRNFEG GTAAWEPVGT GVDRTPESFK LPTPKPEEKP EEKK

Type	Start	End	Confidence
Signal Peptide	1	19	0.77
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	284	0.99