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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73967325
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.34
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAAHLLSAA EVLRGFSVTV EGGLRPEQVS AARERYGPNE LPTEEGKSLW ELVLEQFEDL  60
   61 LVRILLLAAL VSFVLAWFEE GEETTTAFVE PLVIMLILVA NAIVGVWQER NAESAIEALK 120
  121 EYEPEMGKVI RSDRKGVQRI RARDIVPGDI VEVAVGDKVP ADLRLIEIKS TTLRVDQSIL 180
  181 TGESVSVTKH TDAILDPRAV NQDKKNMLFS GTNIAAGKAL GVAVTTGLHT ELGKIRSQMA 240
  241 AVEPDRTPLQ QKLDEFGRQL SHAISVICVA VWLINIGHFA DPAHGGSWVR GAVYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMARKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVCRMFVVA EAEAEAGSCR LHEFTISGTT YAPEGEVRQA EQLVRCGQFD GLVELATICA 420
  421 LCNDSALDYN EAKGVYEKVG EATETALTCL VEKMNVFDTN LQTLSPVERA SACNAVIKQL 480
  481 MRKEFTLEFS RDRKSMSVYC TPTSPGPAAQ GSKMFVKGAP ESVIERCSSV RVGSHRVPLN 540
  541 ATSREQILAK IRDWGSGSDT LRCLALATRD APPRKEDMQL DDCSKFVQYE MDLTFVGCVG 600
  601 MLDPPRPEVA ACIARCHRAG IRVVMITGDN KATAVAICRR LGIFRDAEDV VSKAYTGREF 660
  661 DDLSPEQQRH ACRTACCFAR VEPAHKSRIV ENLQSFNEIT AMTGDGVNDA PALKKAEIGI 720
  721 AMGSGTAVAK SAAEMVLSDD NFASIVAAVE EGRAIYNNMK QFIRYLISSN VGEVVCIFLT 780
  781 AILGLPEALI PVQLLWVNLV TDGLPATALG FNPPDLDIME KLPRNPHEAL ISGWLFFRYL 840
  841 AIGVYVGLAT VAAATWWFLY DAEGPHVTFY QLRNFLKCSE DNPLFADIDC EVFESRFPTT 900
  901 MALSVLVTIE MCNALNSVSE NQSLLRMPPW LNPWLLAAVA MSMALHFLIL LVPPLPLIFQ 960
  961 VTPLSGRQWV VVLQISLPVI LLDEALKYLS RNHMDEEKDH K

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle