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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73966687
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDECTVGFGD HTAAPPPPSS STLRTVCDRP LGQLNMGFGD RPNLELLRAL GELQQRCDIL  60
   61 KEENQMLRKS SFPETEEKVR RLKRKNAELA VIAKRLEERA RKLQETNLKV VSAPVPRPGA 120
  121 SLELCRKALA HQRARDLSET ASALLAKDKE IAALQRECRE LQARLTLVGK EGPQWLHVRD 180
  181 FDRLLRESQR EVLRLQRQIA LRNQQEPPPP PRPPGPAAPA RAGAPAPGAP GEATPQEDVE 240
  241 NPPAGLGEPE KQQRVQQLES ELSKKRKKCE SLEQEARKKQ RRCEELELQL REAQNENARL 300
  301 VEENSRLSGR ATEKQQVEWE NAELRGQLLG VTQERDSALR KSQGLQSKLE SLEQVLKHMR 360
  361 EVAQRRQQLE VEHEQARLSL QEKQEEVRRL QQAQAEAKRE HEGAVQLLES TLDSMQVRVR 420
  421 ELEEQCRSQT ERFSLLAQEL QAFRLHPGPL DLLTSALGYS TLGDHPPPPC CCSTPQPCRG 480
  481 SGPKDLDVPP GSPGRCTPKS SEPTHATVTG VPRRTAKKAE SLSNSSRSES IHNSPKSCPT 540
  541 PEVDTASEVE ELEADSVSLL PAAPEGARGG ARIQVFLARY SYNPFEGPNE NPEAELPLTA 600
  601 GEYIYIYGNM DEDGFFEGEL MDGRRGLVPS NFVERVSDDD LLTSLPPELA DLSHSSGPEL 660
  661 SLLSGGGGGS SSGGQSSGGR SQPRPEDEAE GAELSLSPQP EGLGGPPAVP HPRGLVVLRQ 720
  721 LAHSVVLAWE PPPERVELCG YHICVNGELR QALGPGVPPK AVLENLDLRA GPLRVSVQAL 780
  781 TSQGSSDPLR CCLVLGTRAG VVPSQLRVHR LTATSAEITW VPGNSNLAHA VYLNGEECPP 840
  841 ARPSTYWATF CHLRPGTLYQ ARVEAQLPPR ESWEPGWERP EQRAATLQFT TLPAGPPDAP 900
  901 LDVQIEPGPS PGILIISWLP VTIDAAGTSN GVRVTGYAIY ADGQKIMEVA SPTAGSVLVE 960
  961 LSQLQQLQAC SEVAVRTMSP HGESADSIPA PVPPALVAAS LPATVPCASP RPGSEARPPL1020
 1021 APASPGPGDP TSPLQRPDPR GAREPLGGPP PGEMSRGSHE EPLAPCSQKE AGAAMLGASE1080
 1081 DGKASEPAMG ERAPDPAVSP LAKEETLPAP SSAQGALAQR VPCAEACRGG DPGSGLRPRA1140
 1141 EREDTSELGG RLMNSLVDHG RNSDLSDIQE EEEEEEEEEL GSRTCSFQKQ VVGHSTRENG1200
 1201 AKPQPDPFCE TDSDEEILEQ ILELPLQQFC GKKLFSIPEE EEEEDEEDEE EDEEDEERPG1260
 1261 AGCSSQDPGP PAPAVPGLGC DSGQPRGPGP CPLSPEPCRA GDRLEDVPGL AGGSGRRRGS1320
 1321 GSPEKPPNRR RSPDPREHCS RLLSNGGPQA SGRPGPTRER GSPPMGEGTK GLPEAGGRGR1380
 1381 PPPSRKCSRG RAPESNLASC LSPKCLEISI EYDSEDEPEA GSGGIGITSS CYLGDGEAWG1440
 1441 TAPIGRSRGP LKAHSGPNPS PRLSAWEKGE PERRGRSATG RAKEPPSRAT ETGEPRGQDG1500
 1501 SGRRGPPRRG AQASRASTTD LAPLRSPPEE ALLYQDLPVR VFVALFDYDP VSMSPNPDAG1560
 1561 EEELPFREGQ ILKVFGDKDA DGFYRGEGEG RMGYIPCNMV VEVAVDSPKE RQQLLQRGYL1620
 1621 PPDVLIEGSG NGPFVYSTAR TAGPPPKPRR SKKAEVESPA QPCSGHTQHT SSASLKSPRT1680
 1681 MVAAFDYNPR ESSPNMDVEA ELPFRAGDVI TVFGDMDDDG FYYGELNGRR GLVPSNFLEG1740
 1741 PGPEAGGQDR EPGTPQAESQ VSKLGLYPAG VVAVVAVVVA AAVTGTVLWE GSSRAMIQSS1800
 1801 DGWDPDP

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