YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73966259, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTTGALLIP PALIRCCTRD LIRPLSASFL SRPEIPSKQP SYSSSPLQVA RREFQTSVVS  60
   61 RDIDTAAKFI GAGAATVGVA GSGAGIGTVF GSLIIGYARN PSLKQQLFSY AILGFALSEA 120
  121 MGLFCLMVAF LILFAM

Type	Start	End	Confidence
Cytoplasmic	1	69	0.83
Transmembrane Helix	70	95	0.83
Non-Cytoplasmic	96	110	0.71
Transmembrane Helix	111	134	0.93
Cytoplasmic	135	136	0.71