YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73965728
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGELFRSEEM TLAQLFLQSE AAYCCVSELG ELGKVQFRDL NPDVNVFQRK FVNEVRRCEE  60
   61 MDRKLRFVEK EIRKANIPIM DTGENPEVPF PRDMIDLEAN FEKIENELKE INTNQEALKR 120
  121 NFLELTELKF ILRKTQQFFD ESVKKTGKSV AAWKSDAELH HQQMADPDLL EESSSLLEPS 180
  181 EMGRGTPLRL GFVAGVINRE RIPTFERMLW RVCRGNVFLR QAEIENPLED PVTGDYVHKS 240
  241 VFIIFFQGDQ LKNRVKKICE GFRASLYPCP ETPQERKEMA SGVNTRIDDL QMVLNQTEDH 300
  301 RQRVLQAAAK NIRVWFIKVR KMKAIYHTLN LCNIDVTQKC LIAEVWCPVT DLDSIQFALR 360
  361 RGTEHSGSTV PSILNRMQTN QTPPTYNKTN KFTYGFQNIV DAYGIGTYRE INPAPYTIIT 420
  421 FPFLFAVMFG DFGHGILMTL FAVWMVLRES RILSQKNENE MFSTVFSGRY IILLMGVFSI 480
  481 YTGLIYNDCF SKSLNIFGSS WSVRPMEETL RGNPVLQLNP SVRGVFGGPY PFGIDPIWNI 540
  541 ATNKLTFLNS FKMKTSVILG IIHMMFGVTL SLFNHIYFKK PLNIYFGFIP EIIFMTSLFG 600
  601 YLVILIFYKW TAYNADTSEK APSLLIHFIN MFLFSYGDSS NSMLYSGQKG IQCFLVVVAL 660
  661 LCVPWMLLFK PLMLWEHRKR APDKKTMGRR VSQEGGGKGD NGRHCRGSVR TQNFDFGDTM 720
  721 VHQAIHTIEY CLGCISNTAS YLRLWALSLA HAQLSEVLWT MVIHIGLSVK SLAGGLALFF 780
  781 IFAAFATLTV AILLIMEGLS AFLHALRLHW VEFQNKFYSG TGFKFLPFSF EHIREGKFDE 840
  841 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle