YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73965636
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVVVVERSG GRKSFARRFR VSWATTMAMS FEWPWQYRFP PFFTLQPNVD TRQKQLAAWC  60
   61 SLVLSFCRLH KQSSMTVMEA QESPLFNNVK LQRKLPVESI QVVLEELRKK GNLEWLDKNK 120
  121 SSFLIMWRRP EEWGKLIYQW VSRSGQNNSV FTLYELTNGE DTEDEEFHGL DEATLLRALQ 180
  181 ALQQEHKAEI ITVSDGRGVK FF

Type	Start	End	Confidence
Cytoplasmic	1	18	0.78
Transmembrane Helix	19	37	0.75
Non-Cytoplasmic	38	202	0.94