YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73965478
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTKNESPEP DYQKQFQAAV SVIQNLPKNG SYRPSYEEML RFYSYYKQAT MGPCLVPRPG  60
   61 FWDPIGRYKW DAWNSLGKMS REEAMSAYIT EMKLVAQKVI DTVPLGAVAE DMFAHFEPLY 120
  121 RVIPDMPRPP ETFLRRVTGW REQVLNGDVG ATPEPPCLPR EPEPPSPESQ PPRDLDSEVF 180
  181 CDSLEQLEPE LVWTEQKGAP GGEPDTRNSS MLPAEKEGSL MGPQELDTWL VGTVRALQES 240
  241 MRDVQGRLQS LESMPSLPEQ RTPPRARPWP LRLSGPTLLF FLLWPFIVQW LFRTFRTQKR 300
  301

Type	Start	End	Confidence
Non-Cytoplasmic	1	272	0.77
Transmembrane Helix	273	292	0.91
Cytoplasmic	293	300	0.68