YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73965357
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRAGVAAT PGALPYYVAL SQLLGLTVVA MTGAWLGLYR GGIAWEGALQ FNVHPLCMVI  60
   61 GLIFLQGDAL LVYRVFRNEA KRTTKVLHGL LHVLALIIAL VGLVAVFDYH RQKGYADLYS 120
  121 LHSWCGILVF VLYFMQWLVG FSFFLFPGAS FSLRSRYRPQ HVFFGATIFV LSLGTALLGL 180
  181 KEALLFKLGA KYSTFEAEGV LANVLGLLLA SFGVTVLYIL TRADWKRPPQ AEEQALSMDF 240
  241 KTLTEGDSPS SQ

Type	Start	End	Confidence
Cytoplasmic	1	13	0.95
Transmembrane Helix	14	38	0.86
Non-Cytoplasmic	39	50	0.89
Transmembrane Helix	51	73	0.86
Cytoplasmic	74	85	0.86
Transmembrane Helix	86	107	0.91
Non-Cytoplasmic	108	123	0.84
Transmembrane Helix	124	146	0.86
Cytoplasmic	147	160	0.80
Transmembrane Helix	161	180	0.95
Non-Cytoplasmic	181	198	0.89
Transmembrane Helix	199	221	0.91
Cytoplasmic	222	252	0.99