YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73965329
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPLYQQTHK QVHEIQSHMA RLETADKQSL HLVENEIQAS IDQIFNHLER LEILSSKEPP  60
   61 NKRQNAKLRV DQLKYDVQHL QTALSNFQHR RYAREQQERQ REALLSRTFT TNDSDTTIPM 120
  121 DDSLQFNSSL QKIHHGMDDL IGGGHSILEG LRAQRLTLKG TQKKILDIAN MLGLSNTVMR 180
  181 LIEKRAFQDK YFMIGGMLLT CVLMFLVVQY LT

Type	Start	End	Confidence
Cytoplasmic	1	189	0.93
Transmembrane Helix	190	211	0.90
Non-Cytoplasmic	212	212	0.94