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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|83281191, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.70
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWNLRSISCL LLLCCSAAFV SAQRSDNATS KWLTLTGDAP KVIARGGFSG LMPDSSFNAY  60
   61 ILAKAISVAD WVAWCDVQLT KDGVGICLSD IRLDNSSDVN VLFKNKQNTY LVNGVPQKGW 120
  121 FSVDFNFKDL ALVSLKQGVF SRSPRFDGTP QQILTVQDVA SQVKPPGLWL NIQHDSFYSQ 180
  181 RNLSIRSFVV SLSRSVIVNY ISSPEVNFLR SIARRFNPRV TKFVFRFLGE DGIEPSTNQT 240
  241 YGSLLKNLTF VKTFASGILV PKHYIWPVDN SLYLQPHTSV VLDAHKEGLE IFAADFANDV 300
  301 PSAYNYSYDP VAEYLSYIDN GDFSVDGVLS DFPLTPSSSV DCFSHLGKND KPQVKLQIIT 360
  361 SEGASGDYPG CTDLAYTKAA SDGADVLGCP VQMTKDRVPF CLGSINLIDK TTAAQSPFSN 420
  421 IATTVPELKI TNGILTINLT WTEIQSLKPA ISNRWSEFRL FRNPKARNDG NFMSLADFLT 480
  481 FAKNATSVSG VMISVENAAY MAKQGLGVTG AVLDALSKAG YNNQTAKKVL IQSTDSSVLE 540
  541 EFKKSSYELV YGVGDDIRDI ESSTILEIKT FAKSVIITKQ SVFPSEDAFI IAQTNVVQKL 600
  601 QSSNLTVYVQ LLNNEFVSQS WDFFSDSSVE LNNYAVGAGI DGVITEYPAT AARYRRNRCL 660
  661 GFKDSPPYMT SVQPGSLLEL MAPQFLPPAE APNPVLTESD VVEPPLPPVA KINPSNDNGS 720
  721 AIAPTPPNGQ SSVVASILMS SVAILLATIM VV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle