YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|82946762, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRRMTLSLA LLLGMQALDA QAASEPIQPI TPAKVKDAGL AELGKKLYFD TRLSKSGFIS  60
   61 CNSCHNLSLG GTDNLKTSIG HNWQKGPINA PTVLNSSMNL AQFWDGRAKD LKAQAGGPIA 120
  121 NPGEMAFTHE LAVEVLQSIP GYVAEFKKVF GNDKVTIDEV TKAIAAFEET LVTPNSRFDK 180
  181 WLKGDKKALT KAELAGYALF KDSGCTGCHN GAAVGGNSFQ KMGVVEAYKA SSPAEGRVGV 240
  241 TKDEADRFNF KVPTLRNVEL TYPYFHDGEA ATLKQAVDTM GRIQLGRQFT DDENGKIVAF 300
  301 LKSLTGDQPN FKLPILPPSS DATPRPVPFD K

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	331	0.99