YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83311464, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNRRLVKRL GAGLVVSEMI ASQAMIRQNR QTMQMAQHTA EEFPMSVQLA GCEPKVMAEA  60
   61 AKLNQDLGAA IIDINMGCPV KKVALKGEAG SALMRNENLA ARILTAVVKA VDIPVTLKMR 120
  121 TGWDMNSRNA PSLARVAEEC GIRMVTVHGR TRNQMYTGQA DWAFIGEVKR AVSIPVIGNG 180
  181 DVESIDDAVR MLELSGADGV MIGRGTYGRP WLPGQVAHYL ATGERLPDPS RAEQLQIMLE 240
  241 HLDAMLSHYG SEPGVRIARK HMAWYSKGLP GSAEFRAEVN RTNDPDQLRL AITEFYAPLL 300
  301 EKAAA

Type	Start	End	Confidence
Signal Peptide	1	24	0.87
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	305	0.99