YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83310674, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDARAQSIG HSTNLVGLST SLLGSSAFNE DPRELHISGV REMNKQLFEM LGQSDGLMDA  60
   61 GDAFYKYMMA MFGIDPEQQE ELKGERRRYR SSFLRLLKGW GYDSNAPEGA VLKGWVESRF 120
  121 GLFPTFHKEM ITRFSTQGWA TYVDEKMSSR FHNNSIYCQL DMLYEFCQWG LARHAAPGQT 180
  181 HLTLYRGVNS FDEHQVVERV DRKTVIMRLN NLASFSSDRE VADCFGDTIL TARVPVVKVL 240
  241 FFNTLLPVQP LKGEGEYLVI GGDYRVTASY Y

Type	Start	End	Confidence
Signal Peptide	1	27	0.61
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	271	0.99