YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83309993, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRALDHLEE WLIAFLMGTA TLIIFVAVLQ RYAAGTALLY PLVGHLDFSW AQELCIIMFV  60
   61 WMAKFGAAYG VRTGIHVGVD VVINRLDPQW RAKLIVFGLL AGALFTGIVA TMGGHFVMEN 120
  121 GAHYAFLHAF GLPTGDLYEG PITPDMEAPT WVVYSAIPLG SALMCFRFLQ VCVGFIRTGE 180
  181 LPHHDHGHVE GLEEDTTDPQ RAAQDINWFE MSDNLHPKDA KDDKGDHQGE KRP

Type	Start	End	Confidence
Cytoplasmic	1	10	0.96
Transmembrane Helix	11	33	0.91
Non-Cytoplasmic	34	49	0.84
Transmembrane Helix	50	71	0.80
Cytoplasmic	72	93	0.87
Transmembrane Helix	94	117	0.91
Non-Cytoplasmic	118	149	0.95
Transmembrane Helix	150	171	0.87
Cytoplasmic	172	233	0.95