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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73965211
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSLDGRHAE KTIDMPKPSA PRVHVQRSVS RDTIAIHFSA SGEEEEEEEE EFREYLEEGL  60
   61 DDQSIVTGLE AKEDLYLESQ GGHDSTGLAA QPILADGLSV SPAILPVSEN TVKLLESPPP 120
  121 AVQVLSTVPL ALSPGSSSSG PLASSPSVSS LSEQKTSSSS PLSSPSKSPI LSSSASSSTL 180
  181 SSAKPFMSLV KSLSTEVEPK ESPHPSRHRH LMKTLVKSLS TDTSRQESDT VSYKPPDSKL 240
  241 NLHLFKQFTQ PRNTGGDSKT APSSPLTSPS DTRSFFKVPE MEAKIEDTKR RLSEVICEPL 300
  301 QLLSKIIGEE SGSHRPKALS SSASELSNLS SLNGHLESNN NYSIKEEECD SEGDGSGSDP 360
  361 SVPGSDHPRS SDEPSREAEP KASQGSGLKD LGLKTSSLVL EKCSLSALVS KEDEEFCELY 420
  421 TEDFDLEAEV ESTVDKLPDV PLKPEVLADD GLTLDSEDEA HLAVQHPELP VKTLGFFIMC 480
  481 VYGYLILPLP HYVSGLFLGI GLGFMTAVCM IWFFTPPSAH KYHRFHKNLQ HRNTRSLEIK 540
  541 EPEILKGWMN EIYNYDPETY HATLTHSVFV RLEGGTLRLS KPNKNISRRA SYNETKPEVT 600
  601 YISQKIYDLS DSKIYLVPKS LARKRIWNKK YPICIELGRQ DDFMSKAQTD KETSEEKPPA 660
  661 ERELGGEDPK KPPHPQEGTR SGQRDQILYL FGRTGREKEE WFRRFILASK LKSEIKKPPG 720
  721 VSGSKPGNDT QPLFAAGVLP SHSRHNSPSG HLTHSRSSSK GSVEEIMSQP KQKELVGSVR 780
  781 QKMLLDYSVY MARCVPQENR SPQRSPVQSA ESSPTAGKKL PEAPPSEEEE QEAWVNAFLG 840
  841 RMFWDFLGEK YWSDLVSKKI QMKLSKIKLP YFMNELTLTE LDMGVAMPKI LQAFKPYVDH 900
  901 QGLWIDLEMS YNGSFLMTLE TKMNLTKLGK EPLVEALKVG EIGKEGCRPR AYCLADSDEE 960
  961 SSSAGSSDED DAPEPSAGDK PLLPGAEGYV GGHRTSKIMR FVDKITKSKY FQKATETEFI1020
 1021 KKKIEEVSNT PLLLTVEVQE CRGTLAVNIP PPPTDRIWYG FRKPPYVELK ARPKLGEREV1080
 1081 TLVHVTDWIE KKLEQEFQKV FVMPNMDDVY IPIMHSAMDP RSASCLLKDS LVEAADQL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle