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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73964965
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLCIQGVHSL EPSQPPPGTI RPVHRLPPEG QLREALPACS PAGSARAPAA VNKVLARRKR  60
   61 KRKRRVSMAA AAAAAAGPVL WRRLLGLLPG RPGLAALLGR LSDRLGRNRD RRRRRSPWLL 120
  121 LAPLLSPAVP QVTSPPCCLC PEGVHRFQWI RNLVPEFGVS SSHVRVLASP AEFFELMKGQ 180
  181 IKVAKRRVVM ASLYLGTGPL EQELVDCLEN TLEKSLQAKF PSDLKVSILL DFTRGSRGRK 240
  241 NSRTMLLPLL QRFPEQVRVS LFHTPNLRGL LRLLIPERFN ETIGLQHIKV YLFDNNIILS 300
  301 GANLSDSYFT NRQDRYVFLQ DCPEIADFFT ELVDAVGDVS LQLQGDDTVQ VVEGMVHPYK 360
  361 GDRAAYCRAA NKRVMDVINS ARARQQVLHA QTFHGDSLLT QEDAAAAGDR RPAPDTWIYP 420
  421 LIQMKPFEIQ IDEIVTETLL TEAERGAKIY LTTGYFNLTQ AYMDLVLGTR AEYQILLASP 480
  481 EVNGFFGAKG VAGAIPAAYV HIERQFYREV CSLGQQERVQ LQEYWRRGWT FHAKGLWLYL 540
  541 AGSSLPCLTL IGSPNFGYRS VHRDLEAQIA IVTESRALQQ QLHQEQEQLY LRSGVVSSST 600
  601 FEQPSRQVKL WVKMVTPLIK NFF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle