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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73964705
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAAAASNWG LITNIVNSIV GVSVLTMPFC FKQCGIVLGA LLLVFCSWMT HQSCMFLVKS  60
   61 ASLSKRRTYA GLALHAYGKM GKMLVETSMI GLMLGTCMAF YVVIGDLGSN FFARLFGFQV 120
  121 TGTFRVFLVI VVSLCIVLPL SLQRNMMASI QSFSAMALMF YTVFMFVIVL SSLKHGLFGG 180
  181 QWLQRIRYVR WDGVFRCIPI FGMSFACQSQ VLPTYDSLDE PSVKTMSSIF ASSLNVVTTF 240
  241 YVMVGFFGYV SFTEATAGNV LMHFPSNLVT EMMRVGFMMS VAVGFPMMIL PCRQALNTLL 300
  301 FEQQQKDGTF AAGGYMPPLR FKALTLSVVF GTMVGGIMIP NVETILGLTG ATMGSLICFI 360
  361 CPALIYKKIH KNALSSRVVL WVGLGILMVS THTTLSVSEE APVDLAKEAL AGRLEEAEGI 420
  421 IKAEAARLPG QNPVVDVAED GRDKPKLPND KDEMEQAQIK GPVNVPQREG TKEKQEQAQL 480
  481 DRPGQGVAVP VGEAHRHEPP VPHDKVVVDE GQDQDQPEES EHPSKHVDEK ALGGKAQMVP 540
  541 PPPESERDRP RQDQVLEVAG GLPEDPQNIP EGNGQPAIKP MKEDQGPGNR GLQPGPQALP 600
  601 PDGQDALAAG AGERAAAVPL PGRAAGALGR LAEKSEPGGK APLLLKLAPE AGPQAELREQ 660
  661 RNAEGQGGGG QGGGHAGSKL EEAGRAELLD HAVLLQVIKE QQVQQKRLLD QQEKLLAVIE 720
  721 EQHKEIHQQR QDGEDGKSGP AEAQPEPGVA VPRGKEESHD GETVEPHPQQ PLEPARGAPG 780
  781 HPPAPPQGHG PRSVEEPEGA AGRAPAAPLG AARTEPRAAQ AEPREGRQGA VPEAADAGVQ 840
  841 EQVPEPGPAE APRSPEKLVA AEVLEPGQDA LGRGSHERRR SRKEVGATGA NVQEAEVLGA 900
  901 RETGDLPVKP QPVSRDWGPA GLSSRSGGAA PGAQAETGQL AHRAVSAGGQ AGQQGGHLEA 960
  961 RKEAVGGDRV PVLGVDPAVQ EPEQRQDPDL GPKPAVPGAQ KPDHAKSNRD LKVQAGSDLR1020
 1021 RRRRDVAPGA GGDPAPRDRV IISFNPLPDV QVNDLRSALE TQLHQAAGGA LRVVHGRQVK1080
 1081 QLAGAQEES

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle