YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57090687
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGRVDYLVT EEEINLTRGP SGLGFNIVGG TDQQYVSNDS GIYVSRIKEN GAAALDGRLQ  60
   61 EGDKILSVNG QDLRNLLHQD AVDLFRNAGY AVSLRVQHRV QVQNGPLGHR SEGEPSGIPI 120
  121 ALVLVPVFAL TVIAAWAFMK YRQQL

Type	Start	End	Confidence
Cytoplasmic	1	116	0.61
Transmembrane Helix	117	139	0.92
Non-Cytoplasmic	140	145	0.59