YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73964224
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDERSFSDI CGGRLALQRR YYSPSCREFC LSCPRLSLRS LTAVTCAVWL AAYGLFTLCE  60
   61 NSMILSAAIF ITLLGLLGYL HFVKIDQETL LIIDSLGIQM TSSYASGKES TTFIEMSKVK 120
  121 DVVINEAIYM SAKPRLDCLI EVYRSCQEIL AHQKATPRFV EQDNGKLTSD LLQNMISNCT 180
  181 DPCIKVNPFT YQ

Type	Start	End	Confidence
Cytoplasmic	1	35	0.97
Transmembrane Helix	36	56	0.90
Non-Cytoplasmic	57	62	0.80
Transmembrane Helix	63	83	0.94
Cytoplasmic	84	192	0.94