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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73963940
Protein type: Globular with Signal Peptide
Type Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSPALQPLS MAGLQLMTPA SSPMGPFFGL PWQQEAIHDN IYTPRKYQVE LLEAALDHNT  60
   61 IVCLNTGSGK TFIAVLLTKE LSYQIRGDFN RNGKRTVFLV NSANQVAQQV SAVRTHSDLK 120
  121 VGEYSNLEVN ASWTKEKWNQ EFTKHQVLVM TCYVALNVLK NGYLSLSDIN LLVFDECHLA 180
  181 ILDHPYREIM KLCENCPSCP RILGLTASIL NGKCDPEELE EKIQKLEKIL KSNAETATDL 240
  241 VVLDRYTSQP CEIVVDCGPF TDRSGLYGRL LVELEEALNF INDCNISVHS KERDSTLISK 300
  301 QILSDCRAVL VVLGPWCADK VAGMMVRELQ KYIKHEQEEL HRKFLLFTDT FLRKIHALCE 360
  361 EHFSPASLDL KFVTPKVIKL LEILRKYKPY ERQQFESVEW YNNRNQDNYV SWSDSEDDDE 420
  421 DEEIEEKEKP ETNFPSPFTN ILCGIIFVER RYTAVVLNRL IKEAGKQDPE LAYISSNFIT 480
  481 GHGIGKNQPR NKQMEAEFRK QEEVLRKFRA HETNLLIATS IVEEGVDIPK CNLVVRFDLP 540
  541 TEYRSYVQSK GRARAPISNY IMLADTDKIK SFEEDLKTYK AIEKILRNKC SKSVDTGETD 600
  601 IEPVVDDDDV FPPYVLRPDD GGPRVTINTA IGHINRYCAR LPSDPFTHLA PKCRTRELPD 660
  661 GTFYSTLYLP INSPLRASIV GPPMSCVRLA ERVVALICCE KLHKIGELDD HLMPVGKETV 720
  721 KYEEELDLHD EEETSVPGRP GSTKRRQCYP KAIPECLRDS YPKPDQPCYL YVIGMVLTTP 780
  781 LPDELNFRRR KLYPPEDTTR CFGILTAKPI PQIPHFPVYT RSGEVTISIE LKKSGFTLSL 840
  841 QMLELITRLH QYIFSHILRL EKPALEFKPT DADSAYCVLP LNVVNDSSTL DIDFKFMEDI 900
  901 EKSEARIGIP STKYSKETPF VFKLEDYQDA VIIPRYRNFD QPHRFYVADV YTDLTPLSKF 960
  961 PSPEYETFAE YYKTKYNLDL TNLNQPLLDV DHTSSRLNLL TPRHLNQKGK ALPLSSAEKR1020
 1021 KAKWESLQNK QILVPELCAI HPIPASLWRK AVCLPSILYR LHCLLTAEEL RAQTASDAGV1080
 1081 GVRSLPVDFR YPNLDFGWKK SIDSKSFISV ANSSSAENEN YCKHSTIVVP ENAARQGANR1140
 1141 TSSLENHDQM SVNCRTLFSE SPGKLQIEVV TDLTAINGLS YNKNLANGSY DLANRDFCQG1200
 1201 NQLNYYKQEI PVQPTTSYPI QNLYNYENQP KPSDECTLLS NKYLDGNANK STSDGSPTTA1260
 1261 AMPGTTEAVR ALKDKMGSEQ SPCPGYSSRT LGPNPGLILQ ALTLSNASDG FNLERLEMLG1320
 1321 DSFLKHAITT YLFCTYPDAH EGRLSYMRSK KVSNCNLYRL GKKKGLPSRM VVSIFDPPVN1380
 1381 WLPPGYVVNQ DKSNADKWEK DEMTKDCMLA NGKLDEDFEE DDEEEEDLMW RAPKEDADYE1440
 1441 DDFLEYDQEH IKFIDNMLMG SGAFVKKISL SPFSTTDSAY EWKMPKKSSL GSMPFSSDFE1500
 1501 DFDYSSWDAM CYLDPSKAVE EDDFVVGFWN PSEENCGVDT GKQSISYDLH TEQCIADKSI1560
 1561 ADCVEALLGC YLTSCGERAA QLFLCSLGLK VLPVMKRTDR EKTMCPPREN FSSQQKNLSG1620
 1621 GRAAASVASL RPSVLKDLEY GCLKIPPRCM FDHPDADKTL NHLISGFENF EKKINYRFKN1680
 1681 KAYLLQAFTH ASYHYNTITD CYQRLEFLGD AILDYLITKH LYEDPRQHSP GVLTDLRSAL1740
 1741 VNNTIFASLA VKYDYHKYFK AVSPELFHVI DDFVQFQLEK NEMQGMDSEL RRSEEDEEKE1800
 1801 EDIEVPKAMG DIFESLAGAI YMDSGMSLEM VWQVYYPMMR PLIEKFSANV PRSPVRELLE1860
 1861 MEPETAKFSP AERTYDGKVR VTVEVVGKGK FKGVGRSYRI AKSAAARRAL RSLKANQPQV1920
 1921 PNS

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