YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57090127
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRIYKRKV LILTLVVAAC GFVLWSSNGR QRKNEALAPP LLDAEPARGA GGRGGDHSAV  60
   61 SVGIRRGSNE SAAPLVPAAP QPEADNLTLR YRSLVYQLNF DQTLRNVDKA GSWAPRELVL 120
  121 VVQVHNRPDY LRLLLDSLRK AQGIDNVLVI FSHDFWSTEI NQLIAGVDFC PVLQVFFPFS 180
  181 IQLYPNEFPG SDPRDCPRDL EKNAALKMGC INAEYPDSFG HYREAKFSQT KHHWWWKLHF 240
  241 VWERVKVLRD YAGLILFLEE DHYLAPDFYH VFKKMWKLKQ EECPECDVLS LGTYTAIRSF 300
  301 HGIADKVDVK TWKSTEHNMG LALTRDAYQK LIECTDTFCT YDDYNWDWTL QYLTVSCLPK 360
  361 FWKVLVPQVP RIFHAGDCGM HHKKTCKPST QSAQIESLLN SNKQYLFPET LIISEKFVAA 420
  421 ISPPRKNGGW GDIRDHELCK SYRRLQ

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	446	0.99