YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73963593
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRRGGGGA RASFSSTRAE VPGVAMGRRP ARCYRYCKNK PYPKSRFCRG VPDAKIRIFD  60
   61 LGRKKAKVDE FPLCGHMVSD EYEQLSSEAL EAARICANKY MVKSCGKDGF HIRVRLHPFH 120
  121 VIRINKMLSC AGADRLQTGM RGAFGKPQGT VARVHIGQVI MSVRTKLQNK EHVIEALRRA 180
  181 KFKFPGRQKI HISKKWGFTK FNANEFEDKV AKKRLIPDGC GVKYVPSRGS LDTWRALHS

Type	Start	End	Confidence
Signal Peptide	1	19	0.63
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	239	0.99