YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|73962221
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHRCLRLWG RGGCWQRGLP PLLLAGVRMG PSERSCLRTL YRYATTQATT SRNSLLTDVI  60
   61 AAYQRFCSRP PKGFEKYFPS GKNGKKASQP KEVTGEKKES KPAATPSPSG GGTGGSGKRG 120
  121 GKKDDSHWWS RFQKGDFPWD DKEFRMYFLW TALFWGGVMF YFLFKSSGRE ITWKDFVNNY 180
  181 LSKGVVDRLE VVNKRFVRVT FTPGKTPVDG QYVWFNIGSV DTFERNLETL QQELGIEGEN 240
  241 RVPVVYIAES DGSFLLSMLP TVLIIAFLLY TIRRGPAGIG RTGRGMGGLF SVGETTAKVL 300
  301 KDEIDVKFKD VAGCEEAKLE IMEFVNFLKN PKQYQDLGAK IPKGAILTGP PGTGKTLLAK 360
  361 ATAGEANVPF ITVSGSEFLE MFVGVGPARV RDLFALARKN APCILFIDEI DAVGRKRGRG 420
  421 NFGGQSEQEN TLNQLLVEMD GFNTTTNVVI LAGTNRPDIL DPALMRPGRF DRQIFIGPPD 480
  481 IKGRASIFKV HLRPLKLDSA LEKEKLARKL ASLTPGFSGA DVANVCNEAA LIAARHLSDS 540
  541 INQKHFEQAI ERVIGGLEKK TQVLQPEEKK TVAYHEAGHA VAGWYLEHAD PLLKVSIIPR 600
  601 GKGLGYAQYL PKEQYLYTKE QLLDRMCMTL GGRVSEEIFF GRITTGAQDD LRKVTQSAYA 660
  661 QIVQFGMNEK VGQISFDLPR QGDMVLEKPY SEATARLIDD EVRILINDAY KRTVALLTEK 720
  721 KADVEKVALL LLEKEVLDKN DMVELLGPRP FVEKSTYEEF VEGTGSLDED TSLPEGLKDW 780
  781 NKEREKDKEE PQDEKVANQI PDGRPF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle