YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73961612
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLPLLRTV LWAALLSSPL RGGSGLRHAV YWNSSNPRLL GGDAVVELDL NDYLDIFCPH  60
   61 YEGPGPPGGP ETFALYMVDR PGYEACQAQG PGAFKRWECA LPFAPFGPVR FSEKIQRFTP 120
  121 FSLGFEFLPG ETYYYISVPP PESSGTCLRL QVSVCCKESR SESAHPVGSP GESGRSGWQG 180
  181 GGALSPLCLL LLLLLPILRL LRVL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	177	0.98
Transmembrane Helix	178	201	0.82
Cytoplasmic	202	204	0.84