YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|73961555
Protein type:	Transmembrane
Type Confidence:	0.72
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRPRPRSYY YPRGPQQSAG APGVRSPAPA RGGGASLRPH LQGALPALRM RRASFMSALR  60
   61 ALLGLGLLAA GSRLRRVPGR AGACPAGSAW WEARRPHSGG GGEPAGMASP AVKYLSQEEA 120
  121 QAVDEELFNE YQFSVDQLME LAGLSCATAI AKAYPPTSMS RSPPAVLVIC GPGNNGGDGL 180
  181 VCARHLKLFG YQPTIYYPKR PNKPLFTALV TQCQKMDIPF LGEMPPEPML IDELYELVVD 240
  241 AIFGFSFKGD VREPFRTILS VLDGLTVPIA SIDIPSGWDV EKGNSGGIQP DLLISLTAPK 300
  301 KSATQFTGRY HYLGGRFVPP ALEKKYQLNL PPYPDTECVY RLQ

Type	Start	End	Confidence
Cytoplasmic	1	52	0.67
Transmembrane Helix	53	71	0.66
Non-Cytoplasmic	72	343	0.95