YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57089417
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGVQPLDQN VGNTPGRRFQ KNKVLLVAAI IQGLGLLLCF TYICLHFYAS QVPPQYPPIQ  60
   61 SIRVQFTRCE NEKGCIITSP SKDETMKVQD NSIIINCDGF YLISLKGYFS EELSLSLYYR 120
  121 KGRGPLFSLS KVTSVDSIGV AYLAFKDKVY FNVTTHSTSY KDIQVNGGEL ILIHQNPGGF 180
  181 CAY

Type	Start	End	Confidence
Cytoplasmic	1	24	0.96
Transmembrane Helix	25	49	0.91
Non-Cytoplasmic	50	183	0.98